FEV_KEGG.Experiments.07 module

Question

Which reaction edges (substrate -> reaction ID -> product) are present in eco01100, but not in a combination of all non-overview metabolic pathways?

Method

  • Download pathway description as KGML.
  • Convert to substance-reaction graph.
  • Calculate difference (eco01100 - allNonOverviewPathways). Do not subtract nodes, to keep all surviving edges.
  • Print reaction edges (substrate -> reaction ID -> product).

Result

877 results
C00002 -> R02014 -> C00131
C00003 -> R00189 -> C00857
C00003 -> R00257 -> C00857
C00006 -> R00104 -> C00003
C00010 -> R00130 -> C00882
C00011 -> R00214 -> C00149
C00011 -> R00216 -> C00149
C00011 -> R00345 -> C00036
C00014 -> R00149 -> C00169
C00014 -> R01221 -> C00037
C00016 -> R00160 -> C00061
C00016 -> R00161 -> C00061
C00018 -> R00173 -> C00250
C00018 -> R00174 -> C00250
C00018 -> R00277 -> C00647
C00018 -> R00278 -> C00627
C00019 -> R00177 -> C00073
C00019 -> R10404 -> C00021
C00020 -> R00185 -> C00212
C00020 -> R01083 -> C03794
C00021 -> R04858 -> C00019
C00021 -> R10404 -> C00019
C00022 -> R00196 -> C00186
C00022 -> R00200 -> C00074
C00022 -> R00206 -> C00074
C00022 -> R00209 -> C00024
C00022 -> R00220 -> C00065
C00022 -> R00369 -> C00041
C00022 -> R00396 -> C00041
C00022 -> R00400 -> C00041
C00022 -> R00703 -> C00186
C00022 -> R01447 -> C00186
C00022 -> R02320 -> C00074
C00022 -> R03105 -> C00957
C00024 -> R00209 -> C00022
C00024 -> R00229 -> C00033
C00024 -> R00352 -> C00158
C00025 -> R00093 -> C00026
C00025 -> R00114 -> C00026
C00025 -> R00243 -> C00026
C00025 -> R00355 -> C00049
C00025 -> R00411 -> C05931
C00026 -> R00243 -> C00025
C00026 -> R00267 -> C00311
C00026 -> R00709 -> C00311
C00029 -> R00287 -> C00103
C00031 -> R00010 -> C01083
C00031 -> R00028 -> C00208
C00031 -> R00305 -> C00198
C00031 -> R00306 -> C00185
C00031 -> R00801 -> C00089
C00031 -> R01555 -> C00208
C00031 -> R02727 -> C01083
C00031 -> R05196 -> C00208
C00031 -> R07147 -> C00198
C00032 -> R00310 -> C02191
C00033 -> R00229 -> C00024
C00033 -> R00320 -> C00227
C00033 -> R00710 -> C00084
C00036 -> R00345 -> C00011
C00036 -> R00345 -> C00074
C00036 -> R00346 -> C00074
C00036 -> R00352 -> C00158
C00036 -> R00357 -> C00049
C00036 -> R00361 -> C00149
C00036 -> R00431 -> C00074
C00036 -> R00726 -> C00074
C00037 -> R00899 -> C01419
C00039 -> R00377 -> C00458
C00039 -> R00378 -> C00459
C00041 -> R00369 -> C00022
C00041 -> R00396 -> C00022
C00041 -> R00400 -> C00022
C00041 -> R03599 -> C05688
C00042 -> R00432 -> C00091
C00042 -> R00713 -> C00232
C00042 -> R00714 -> C00232
C00042 -> R00727 -> C00091
C00042 -> R10343 -> C00091
C00043 -> R00414 -> C00645
C00043 -> R00416 -> C04501
C00044 -> R02020 -> C00286
C00046 -> R00442 -> C00063
C00046 -> R00443 -> C00075
C00047 -> R00451 -> C00680
C00048 -> R00475 -> C00160
C00048 -> R00479 -> C00311
C00048 -> R00717 -> C00160
C00049 -> R00355 -> C00025
C00049 -> R00485 -> C00152
C00049 -> R07407 -> C05840
C00049 -> R07410 -> C05840
C00051 -> R00497 -> C00037
C00051 -> R00497 -> C00669
C00051 -> R01918 -> C05730
C00052 -> R00502 -> C00446
C00053 -> R00509 -> C00224
C00055 -> R00513 -> C00475
C00055 -> R00516 -> C00475
C00055 -> R00517 -> C00475
C00055 -> R00962 -> C00475
C00055 -> R01548 -> C00475
C00055 -> R02091 -> C00475
C00055 -> R02096 -> C00475
C00055 -> R02371 -> C00475
C00055 -> R02372 -> C00475
C00058 -> R00519 -> C00080
C00059 -> R00530 -> C00224
C00059 -> R00531 -> C00224
C00061 -> R00160 -> C00016
C00061 -> R00549 -> C00255
C00061 -> R00550 -> C00255
C00061 -> R05705 -> C01847
C00061 -> R08574 -> C00255
C00062 -> R01086 -> C03406
C00063 -> R00571 -> C00075
C00063 -> R00573 -> C00075
C00063 -> R02022 -> C00458
C00064 -> R00253 -> C00014
C00064 -> R00253 -> C00025
C00065 -> R00582 -> C01005
C00068 -> R00616 -> C03028
C00068 -> R00617 -> C01081
C00068 -> R00618 -> C03028
C00073 -> R00648 -> C01180
C00073 -> R00650 -> C00155
C00073 -> R00946 -> C00155
C00073 -> R02821 -> C00155
C00073 -> R04405 -> C00155
C00073 -> R07396 -> C01180
C00074 -> R00199 -> C00022
C00074 -> R00206 -> C00022
C00074 -> R00346 -> C00036
C00074 -> R00431 -> C00036
C00074 -> R00726 -> C00036
C00077 -> R00669 -> C00437
C00077 -> R02282 -> C00437
C00078 -> R00674 -> C00463
C00078 -> R02722 -> C00065
C00079 -> R00688 -> C00166
C00079 -> R00689 -> C00166
C00079 -> R00692 -> C00166
C00080 -> R00519 -> C00058
C00082 -> R00729 -> C01179
C00082 -> R09254 -> C01179
C00084 -> R00710 -> C00033
C00084 -> R00746 -> C00469
C00084 -> R05198 -> C00469
C00084 -> R09127 -> C00469
C00085 -> R00762 -> C00354
C00085 -> R01067 -> C00279
C00091 -> R00432 -> C00042
C00091 -> R00727 -> C00042
C00091 -> R10343 -> C00042
C00093 -> R00841 -> C00116
C00093 -> R00847 -> C00116
C00094 -> R00859 -> C00283
C00094 -> R00861 -> C00283
C00094 -> R02021 -> C00053
C00095 -> R00801 -> C00089
C00095 -> R00866 -> C01094
C00096 -> R00883 -> C00636
C00097 -> R00895 -> C00957
C00097 -> R00897 -> C00283
C00097 -> R00897 -> C00979
C00097 -> R00899 -> C01419
C00097 -> R04859 -> C00979
C00099 -> R00489 -> C00049
C00099 -> R00907 -> C00222
C00099 -> R02474 -> C00864
C00100 -> R00919 -> C00894
C00100 -> R00927 -> C03344
C00100 -> R04432 -> C00894
C00100 -> R10161 -> C00894
C00101 -> R00937 -> C00504
C00101 -> R00940 -> C00504
C00101 -> R00943 -> C00234
C00101 -> R01225 -> C00143
C00101 -> R04326 -> C00445
C00101 -> R06613 -> C00143
C00103 -> R00287 -> C00029
C00103 -> R00951 -> C00498
C00103 -> R02111 -> C00369
C00105 -> R00662 -> C00075
C00105 -> R00964 -> C00299
C00105 -> R00965 -> C01103
C00105 -> R00967 -> C00299
C00105 -> R00968 -> C00299
C00105 -> R00970 -> C00299
C00105 -> R01549 -> C00299
C00105 -> R01880 -> C00299
C00105 -> R02097 -> C00299
C00105 -> R02327 -> C00299
C00105 -> R02332 -> C00299
C00106 -> R00974 -> C00380
C00106 -> R00978 -> C00429
C00108 -> R00985 -> C00251
C00108 -> R00986 -> C00251
C00109 -> R00996 -> C00188
C00109 -> R00999 -> C01118
C00111 -> R01011 -> C00184
C00114 -> R01022 -> C00576
C00114 -> R08557 -> C00576
C00114 -> R08558 -> C00576
C00116 -> R00841 -> C00093
C00116 -> R01039 -> C00184
C00118 -> R01063 -> C00236
C00118 -> R01064 -> C01286
C00120 -> R01078 -> C01909
C00120 -> R10127 -> C20386
C00122 -> R00490 -> C00049
C00122 -> R01086 -> C03406
C00123 -> R01088 -> C00233
C00124 -> R01678 -> C00243
C00129 -> R05884 -> C11811
C00130 -> R01128 -> C00262
C00131 -> R02014 -> C00002
C00131 -> R11634 -> C00002
C00134 -> R00670 -> C00077
C00134 -> R01151 -> C00555
C00134 -> R01156 -> C02714
C00134 -> R01157 -> C00179
C00134 -> R01920 -> C00170
C00134 -> R08714 -> C00555
C00135 -> R01163 -> C01929
C00136 -> R01171 -> C00877
C00136 -> R01176 -> C00246
C00137 -> R01186 -> C03546
C00137 -> R01187 -> C04006
C00137 -> R07279 -> C04006
C00140 -> R00022 -> C01674
C00141 -> R01434 -> C00183
C00141 -> R04441 -> C04272
C00143 -> R01217 -> C00440
C00143 -> R01218 -> C00445
C00143 -> R01225 -> C00101
C00143 -> R04125 -> C01242
C00143 -> R06613 -> C00101
C00144 -> R01230 -> C00655
C00144 -> R01231 -> C00655
C00147 -> R01245 -> C00212
C00149 -> R00214 -> C00011
C00149 -> R00216 -> C00011
C00152 -> R00483 -> C00049
C00154 -> R01278 -> C05272
C00155 -> R01286 -> C02291
C00155 -> R01287 -> C01077
C00155 -> R01288 -> C01118
C00155 -> R01290 -> C02291
C00155 -> R01291 -> C03539
C00155 -> R02026 -> C01077
C00155 -> R02821 -> C00073
C00155 -> R10305 -> C02291
C00156 -> R05000 -> C05848
C00157 -> R07064 -> C01595
C00158 -> R00352 -> C00024
C00158 -> R00352 -> C00036
C00158 -> R01324 -> C00311
C00159 -> R01326 -> C00275
C00160 -> R00717 -> C00048
C00160 -> R01334 -> C00988
C00166 -> R00688 -> C00079
C00166 -> R00689 -> C00079
C00166 -> R00692 -> C00079
C00169 -> R00149 -> C00014
C00169 -> R00575 -> C00064
C00170 -> R01920 -> C00134
C00170 -> R01920 -> C01137
C00173 -> R10121 -> C19845
C00178 -> R01415 -> C21028
C00178 -> R01570 -> C00214
C00179 -> R00566 -> C00062
C00181 -> R01433 -> C02352
C00183 -> R01434 -> C00141
C00184 -> R01039 -> C00116
C00185 -> R02887 -> C01898
C00185 -> R11308 -> C01898
C00186 -> R00703 -> C00022
C00186 -> R01447 -> C00022
C00188 -> R01466 -> C01102
C00191 -> R01478 -> C03033
C00194 -> R01492 -> C00853
C00194 -> R05223 -> C05775
C00194 -> R05223 -> C06510
C00198 -> R00305 -> C00031
C00198 -> R06620 -> C00031
C00198 -> R07147 -> C00031
C00199 -> R01523 -> C01182
C00199 -> R01528 -> C00345
C00199 -> R10221 -> C00345
C00204 -> R01540 -> C00817
C00206 -> R02017 -> C00008
C00208 -> R01555 -> C00031
C00208 -> R11262 -> C01935
C00212 -> R00183 -> C00020
C00212 -> R00185 -> C00020
C00214 -> R01569 -> C00364
C00217 -> R01579 -> C00819
C00222 -> R00907 -> C00099
C00222 -> R09983 -> C20253
C00224 -> R00508 -> C00053
C00224 -> R00530 -> C00059
C00224 -> R00531 -> C00059
C00227 -> R00320 -> C00033
C00232 -> R09281 -> C00989
C00232 -> R10178 -> C00334
C00233 -> R01088 -> C00123
C00234 -> R00943 -> C00101
C00235 -> R01122 -> C04432
C00236 -> R01063 -> C00118
C00239 -> R01667 -> C00705
C00245 -> R01682 -> C00506
C00246 -> R01176 -> C00136
C00249 -> R01274 -> C00154
C00250 -> R00173 -> C00018
C00251 -> R01714 -> C01269
C00253 -> R01268 -> C00153
C00254 -> R01730 -> C01179
C00254 -> R07276 -> C00826
C00255 -> R00066 -> C04332
C00255 -> R00548 -> C00061
C00255 -> R00550 -> C00061
C00255 -> R08574 -> C00061
C00257 -> R01741 -> C06473
C00262 -> R01128 -> C00130
C00262 -> R01244 -> C00147
C00262 -> R01769 -> C00385
C00262 -> R02748 -> C05512
C00267 -> R01678 -> C00243
C00267 -> R01788 -> C00668
C00267 -> R02189 -> C00668
C00267 -> R09085 -> C00668
C00269 -> R01799 -> C00416
C00275 -> R01326 -> C00159
C00275 -> R02630 -> C00159
C00279 -> R01067 -> C00085
C00279 -> R01829 -> C00447
C00283 -> R00859 -> C00094
C00283 -> R00861 -> C00094
C00286 -> R01858 -> C00361
C00286 -> R02020 -> C00044
C00286 -> R11633 -> C00044
C00294 -> R01126 -> C00130
C00294 -> R01560 -> C00212
C00295 -> R01867 -> C00337
C00295 -> R01869 -> C00337
C00299 -> R01878 -> C00475
C00311 -> R00267 -> C00026
C00311 -> R00709 -> C00026
C00311 -> R01324 -> C00158
C00314 -> R01911 -> C00627
C00315 -> R01918 -> C05730
C00315 -> R01920 -> C00134
C00315 -> R01920 -> C01137
C00327 -> R01398 -> C00077
C00327 -> R01398 -> C00169
C00327 -> R09107 -> C15532
C00330 -> R01967 -> C00362
C00334 -> R00261 -> C00025
C00334 -> R01986 -> C00555
C00334 -> R02549 -> C00555
C00334 -> R07419 -> C15767
C00334 -> R10178 -> C00232
C00337 -> R01867 -> C00295
C00337 -> R01869 -> C00295
C00341 -> R01658 -> C00129
C00341 -> R01658 -> C00235
C00344 -> R02029 -> C03892
C00345 -> R01737 -> C00257
C00345 -> R02035 -> C01236
C00350 -> R02055 -> C02737
C00350 -> R07376 -> C02737
C00352 -> R00768 -> C05345
C00357 -> R01201 -> C00140
C00360 -> R02089 -> C00559
C00361 -> R02019 -> C00035
C00362 -> R01967 -> C00330
C00364 -> R01567 -> C00214
C00364 -> R02101 -> C00365
C00365 -> R02100 -> C00460
C00366 -> R02103 -> C00385
C00366 -> R02107 -> C00385
C00369 -> R02110 -> C00718
C00376 -> R02124 -> C00473
C00376 -> R08379 -> C00473
C00378 -> R02135 -> C01081
C00380 -> R02137 -> C00475
C00380 -> R02296 -> C00475
C00385 -> R01676 -> C00242
C00385 -> R01768 -> C00262
C00385 -> R01769 -> C00262
C00385 -> R02107 -> C00366
C00387 -> R01227 -> C00144
C00399 -> R08781 -> C17562
C00407 -> R02197 -> C00671
C00415 -> R02237 -> C00921
C00416 -> R02239 -> C00641
C00416 -> R02240 -> C00641
C00416 -> R02241 -> C00681
C00416 -> R09944 -> C00641
C00429 -> R00978 -> C00106
C00430 -> R02272 -> C03741
C00437 -> R02282 -> C00077
C00437 -> R02283 -> C01250
C00438 -> R01397 -> C00169
C00440 -> R01217 -> C00143
C00440 -> R01224 -> C00143
C00440 -> R07168 -> C00143
C00441 -> R02291 -> C03082
C00445 -> R01218 -> C00143
C00445 -> R02301 -> C03479
C00446 -> R00502 -> C00052
C00446 -> R01092 -> C00984
C00447 -> R01829 -> C00279
C00448 -> R02003 -> C00129
C00448 -> R02003 -> C00341
C00455 -> R00103 -> C00003
C00455 -> R02324 -> C03150
C00458 -> R02022 -> C00063
C00458 -> R11636 -> C00063
C00460 -> R02325 -> C00458
C00469 -> R00746 -> C00084
C00469 -> R05198 -> C00084
C00469 -> R09127 -> C00084
C00470 -> R02362 -> C00714
C00473 -> R02124 -> C00376
C00473 -> R08379 -> C00376
C00475 -> R02296 -> C00380
C00493 -> R02415 -> C02637
C00498 -> R00951 -> C00103
C00519 -> R02466 -> C00606
C00522 -> R02474 -> C00864
C00534 -> R02494 -> C00647
C00541 -> R00097 -> C00992
C00541 -> R00107 -> C00992
C00555 -> R01151 -> C00134
C00555 -> R01155 -> C00134
C00555 -> R01986 -> C00334
C00555 -> R08714 -> C00134
C00558 -> R01983 -> C00333
C00559 -> R02089 -> C00360
C00576 -> R01022 -> C00114
C00576 -> R08211 -> C00719
C00576 -> R08557 -> C00114
C00576 -> R08558 -> C00114
C00590 -> R02596 -> C15805
C00601 -> R02537 -> C07086
C00624 -> R00259 -> C00025
C00627 -> R01909 -> C00314
C00627 -> R01911 -> C00314
C00627 -> R05838 -> C11638
C00631 -> R08572 -> C00258
C00636 -> R00883 -> C00096
C00641 -> R02239 -> C00416
C00641 -> R09944 -> C00416
C00645 -> R00414 -> C00043
C00647 -> R02493 -> C00534
C00647 -> R02494 -> C00534
C00655 -> R01130 -> C00130
C00666 -> R02734 -> C04421
C00668 -> R01788 -> C00267
C00668 -> R02189 -> C00267
C00668 -> R09085 -> C00267
C00669 -> R00894 -> C00025
C00669 -> R00894 -> C00097
C00671 -> R02197 -> C00407
C00671 -> R05070 -> C06007
C00681 -> R00851 -> C00093
C00689 -> R02737 -> C00029
C00692 -> R02783 -> C01212
C00705 -> R01667 -> C00239
C00705 -> R02024 -> C00112
C00718 -> R02421 -> C00498
C00719 -> R02565 -> C00576
C00719 -> R02566 -> C00576
C00719 -> R08211 -> C00576
C00721 -> R02112 -> C00369
C00748 -> R02864 -> C05778
C00760 -> R02889 -> C00029
C00798 -> R01908 -> C00313
C00817 -> R02555 -> C00558
C00826 -> R01731 -> C00254
C00826 -> R07276 -> C00254
C00828 -> R04993 -> C05818
C00857 -> R00257 -> C00003
C00860 -> R03013 -> C01100
C00864 -> R02473 -> C00099
C00864 -> R02473 -> C00522
C00864 -> R02474 -> C00099
C00864 -> R02474 -> C00522
C00877 -> R01171 -> C00136
C00877 -> R01175 -> C00136
C00894 -> R04432 -> C00100
C00894 -> R10161 -> C00100
C00921 -> R03066 -> C00568
C00921 -> R03066 -> C01300
C00921 -> R03067 -> C00568
C00921 -> R03067 -> C04807
C00931 -> R00036 -> C00430
C00944 -> R03083 -> C04691
C00957 -> R00895 -> C00097
C00966 -> R01226 -> C00141
C00979 -> R04859 -> C00097
C00984 -> R10619 -> C00124
C00989 -> R09281 -> C00232
C00992 -> R00107 -> C00541
C00993 -> R01150 -> C00133
C01007 -> R05707 -> C00255
C01007 -> R09750 -> C00255
C01013 -> R09289 -> C00222
C01024 -> R00084 -> C00931
C01037 -> R03231 -> C01092
C01037 -> R10699 -> C01092
C01050 -> R03191 -> C04631
C01050 -> R03192 -> C04631
C01051 -> R03165 -> C01024
C01077 -> R01287 -> C00155
C01079 -> R03220 -> C03263
C01079 -> R03222 -> C02191
C01079 -> R06895 -> C03263
C01081 -> R00615 -> C00068
C01081 -> R02134 -> C00378
C01081 -> R03223 -> C04327
C01081 -> R03223 -> C04752
C01081 -> R10712 -> C04752
C01081 -> R10712 -> C20247
C01083 -> R02727 -> C00031
C01083 -> R02778 -> C00689
C01092 -> R03210 -> C01063
C01092 -> R10124 -> C19845
C01092 -> R10699 -> C01037
C01094 -> R00866 -> C00095
C01094 -> R03232 -> C00095
C01097 -> R05571 -> C06311
C01102 -> R01771 -> C00263
C01134 -> R03269 -> C04352
C01137 -> R00178 -> C00019
C01146 -> R00013 -> C00048
C01146 -> R01394 -> C00168
C01157 -> R03291 -> C04281
C01157 -> R03293 -> C04281
C01157 -> R03295 -> C04281
C01165 -> R03313 -> C03287
C01170 -> R00420 -> C00043
C01179 -> R00729 -> C00082
C01179 -> R01730 -> C00254
C01179 -> R09254 -> C00082
C01180 -> R00648 -> C00073
C01182 -> R01523 -> C00199
C01185 -> R03004 -> C00857
C01185 -> R03348 -> C03722
C01187 -> R03350 -> C04478
C01190 -> R03354 -> C01290
C01190 -> R03355 -> C01290
C01212 -> R03193 -> C01050
C01216 -> R03033 -> C00880
C01222 -> R00888 -> C00096
C01236 -> R02736 -> C01172
C01236 -> R10907 -> C01172
C01242 -> R03425 -> C00037
C01250 -> R03443 -> C04133
C01267 -> R03457 -> C04666
C01268 -> R03459 -> C01304
C01286 -> R03387 -> C01216
C01290 -> R03354 -> C01190
C01300 -> R03504 -> C04874
C01304 -> R00425 -> C00044
C01419 -> R00494 -> C00051
C01528 -> R03599 -> C05688
C01595 -> R07064 -> C00157
C01672 -> R00462 -> C00047
C01672 -> R06740 -> C12455
C01674 -> R02334 -> C00461
C01762 -> R02719 -> C00655
C01832 -> R03856 -> C03221
C01847 -> R05705 -> C00061
C01847 -> R05706 -> C00061
C01898 -> R11308 -> C00185
C01909 -> R03182 -> C01037
C01929 -> R03012 -> C00860
C01944 -> R03776 -> C05276
C02059 -> R06859 -> C13309
C02191 -> R03222 -> C01079
C02191 -> R09489 -> C01079
C02222 -> R08121 -> C16476
C02232 -> R06941 -> C14145
C02282 -> R03652 -> C00064
C02291 -> R01290 -> C00155
C02291 -> R03217 -> C01077
C02291 -> R03260 -> C01118
C02291 -> R10305 -> C00155
C02325 -> R03919 -> C15806
C02463 -> R03194 -> C01051
C02504 -> R01213 -> C00141
C02565 -> R02922 -> C00791
C02593 -> R03989 -> C05273
C02637 -> R02415 -> C00493
C02646 -> R04007 -> C15804
C02714 -> R01154 -> C00134
C02714 -> R01156 -> C00134
C02723 -> R04027 -> C06178
C02730 -> R04031 -> C05817
C02737 -> R01800 -> C00269
C02737 -> R07376 -> C00350
C02741 -> R04035 -> C02739
C02987 -> R05578 -> C00025
C03028 -> R00616 -> C00068
C03028 -> R00618 -> C00068
C03028 -> R11319 -> C00068
C03082 -> R00480 -> C00049
C03089 -> R01401 -> C00170
C03090 -> R01072 -> C00119
C03160 -> R04030 -> C02730
C03175 -> R02412 -> C00493
C03221 -> R03856 -> C01832
C03221 -> R03857 -> C01832
C03263 -> R03197 -> C01051
C03287 -> R00239 -> C00025
C03291 -> R07125 -> C14899
C03296 -> R00832 -> C00062
C03373 -> R04208 -> C04640
C03406 -> R01954 -> C00049
C03406 -> R01954 -> C00327
C03415 -> R04189 -> C03296
C03453 -> R03966 -> C02501
C03492 -> R03018 -> C00864
C03492 -> R04230 -> C04352
C03539 -> R00194 -> C00021
C03589 -> R02601 -> C00596
C03657 -> R07262 -> C15547
C03684 -> R04286 -> C04895
C03722 -> R04292 -> C05840
C03741 -> R04109 -> C02987
C03794 -> R01135 -> C00130
C03838 -> R04144 -> C03090
C03892 -> R01801 -> C00269
C03912 -> R01253 -> C00148
C03972 -> R04198 -> C20258
C03972 -> R04199 -> C20258
C04006 -> R07279 -> C00137
C04043 -> R04300 -> C03758
C04121 -> R03351 -> C01187
C04133 -> R02649 -> C00624
C04257 -> R02705 -> C00645
C04281 -> R03295 -> C01157
C04317 -> R03438 -> C05212
C04317 -> R07387 -> C05212
C04327 -> R04448 -> C04294
C04332 -> R04457 -> C04732
C04332 -> R04457 -> C15556
C04352 -> R04230 -> C03492
C04352 -> R04231 -> C03492
C04376 -> R04325 -> C03838
C04405 -> R04204 -> C03345
C04432 -> R01122 -> C00235
C04442 -> R01541 -> C00204
C04442 -> R02036 -> C00345
C04454 -> R03458 -> C01268
C04462 -> R04365 -> C03972
C04478 -> R03254 -> C01112
C04501 -> R05332 -> C06156
C04556 -> R03471 -> C01279
C04556 -> R03472 -> C03373
C04631 -> R00660 -> C00043
C04635 -> R04413 -> C04756
C04635 -> R07379 -> C04756
C04640 -> R04463 -> C04376
C04652 -> R04550 -> C06022
C04666 -> R04558 -> C04916
C04677 -> R06975 -> C04734
C04691 -> R01826 -> C00074
C04691 -> R01826 -> C00279
C04702 -> R04573 -> C05892
C04732 -> R07280 -> C04454
C04734 -> R04560 -> C04677
C04734 -> R06975 -> C04677
C04738 -> R04567 -> C00043
C04752 -> R04509 -> C04556
C04756 -> R04413 -> C04635
C04778 -> R04148 -> C03114
C04807 -> R03503 -> C01300
C04824 -> R04549 -> C04652
C04851 -> R05629 -> C04702
C04874 -> R04620 -> C04895
C04895 -> R04639 -> C06148
C04896 -> R04037 -> C02741
C04916 -> R04640 -> C04896
C04919 -> R04657 -> C04932
C04932 -> R04606 -> C04652
C04932 -> R04606 -> C04824
C05172 -> R03595 -> C01528
C05212 -> R03438 -> C04317
C05270 -> R06985 -> C05271
C05271 -> R04751 -> C05270
C05271 -> R06985 -> C05270
C05272 -> R01278 -> C00154
C05272 -> R01279 -> C00154
C05273 -> R03989 -> C02593
C05273 -> R03990 -> C02593
C05274 -> R04753 -> C05275
C05275 -> R04753 -> C05274
C05275 -> R04754 -> C05274
C05276 -> R03776 -> C01944
C05276 -> R03777 -> C01944
C05345 -> R00867 -> C00095
C05345 -> R02073 -> C05378
C05345 -> R04780 -> C05378
C05345 -> R09084 -> C05378
C05378 -> R02073 -> C05345
C05378 -> R04779 -> C05345
C05378 -> R09084 -> C05345
C05527 -> R02619 -> C00606
C05730 -> R01917 -> C00051
C05730 -> R01917 -> C00315
C05744 -> R04355 -> C01209
C05744 -> R04355 -> C03939
C05744 -> R10707 -> C01209
C05746 -> R04952 -> C01209
C05746 -> R04952 -> C05745
C05750 -> R04957 -> C01209
C05750 -> R04957 -> C05749
C05753 -> R04960 -> C01209
C05753 -> R04960 -> C05752
C05756 -> R04963 -> C01209
C05756 -> R04963 -> C05755
C05759 -> R04726 -> C01209
C05759 -> R04726 -> C05223
C05762 -> R04968 -> C01209
C05762 -> R04968 -> C05761
C05768 -> R04972 -> C05766
C05775 -> R04594 -> C04778
C05778 -> R03947 -> C02463
C05791 -> R04979 -> C05787
C05807 -> R04985 -> C05848
C05807 -> R08768 -> C17551
C05817 -> R08166 -> C16519
C05818 -> R05617 -> C03657
C05840 -> R00481 -> C00049
C05840 -> R07407 -> C00049
C05840 -> R07410 -> C00049
C05848 -> R04985 -> C05807
C05848 -> R05000 -> C00156
C05893 -> R05662 -> C04851
C05921 -> R01074 -> C00120
C05922 -> R00428 -> C00044
C05923 -> R05046 -> C05922
C05924 -> R09395 -> C18239
C05931 -> R05049 -> C05932
C05932 -> R04217 -> C03415
C05946 -> R05052 -> C05947
C05946 -> R05053 -> C05947
C05947 -> R04444 -> C04281
C05947 -> R04445 -> C04281
C05947 -> R05053 -> C05946
C05980 -> R07390 -> C00344
C05980 -> R11062 -> C00344
C06000 -> R04224 -> C03460
C06001 -> R05066 -> C06002
C06002 -> R05066 -> C06001
C06006 -> R08648 -> C00022
C06006 -> R08648 -> C00109
C06010 -> R00226 -> C00022
C06022 -> R04587 -> C04738
C06024 -> R04658 -> C04121
C06024 -> R04658 -> C04919
C06025 -> R05074 -> C04121
C06025 -> R05074 -> C06024
C06026 -> R05075 -> C06251
C06040 -> R05081 -> C06041
C06041 -> R05081 -> C06040
C06148 -> R05048 -> C05923
C06157 -> R01940 -> C00322
C06178 -> R04027 -> C02723
C06250 -> R05145 -> C05921
C06251 -> R05146 -> C06025
C06311 -> R05570 -> C01697
C06329 -> R05511 -> C04706
C06397 -> R05644 -> C07838
C06398 -> R05176 -> C06397
C06427 -> R07859 -> C00157
C06427 -> R07860 -> C00157
C06473 -> R01741 -> C00257
C06506 -> R05220 -> C06505
C06509 -> R05221 -> C06508
C06509 -> R06558 -> C06508
C06510 -> R05222 -> C06509
C06613 -> R05233 -> C06611
C07086 -> R02536 -> C00601
C07086 -> R02537 -> C00601
C07335 -> R05681 -> C06055
C07479 -> R05389 -> C07478
C07836 -> R05645 -> C05382
C07838 -> R05647 -> C11472
C11434 -> R05688 -> C11437
C11435 -> R05633 -> C11434
C11436 -> R05634 -> C11435
C11453 -> R05637 -> C11436
C11472 -> R05646 -> C07836
C11811 -> R08689 -> C11453
C11811 -> R10859 -> C11453
C12248 -> R06601 -> C11821
C12455 -> R06740 -> C01672
C12835 -> R06835 -> C12834
C13309 -> R06858 -> C03657
C14145 -> R06942 -> C14144
C14899 -> R07677 -> C16186
C15556 -> R07281 -> C00199
C15667 -> R07404 -> C03373
C15672 -> R07411 -> C00032
C15699 -> R07414 -> C00134
C15700 -> R07415 -> C15699
C15767 -> R07417 -> C15700
C15767 -> R07418 -> C15700
C15804 -> R04007 -> C02646
C15805 -> R02596 -> C00590
C15806 -> R03919 -> C02325
C15809 -> R10246 -> C00082
C15812 -> R07460 -> C00097
C15812 -> R07460 -> C15811
C15813 -> R07459 -> C15810
C15814 -> R07461 -> C15812
C15814 -> R07461 -> C15813
C15996 -> R09978 -> C20248
C16186 -> R07671 -> C00072
C16236 -> R07766 -> C05752
C16237 -> R07767 -> C16236
C16237 -> R07769 -> C16239
C16237 -> R11143 -> C16241
C16239 -> R07768 -> C05752
C16331 -> R07891 -> C16330
C16335 -> R07895 -> C16334
C16339 -> R07899 -> C16338
C16348 -> R05234 -> C06612
C16519 -> R08165 -> C00885
C16675 -> R07605 -> C15996
C17551 -> R08768 -> C05807
C17551 -> R08769 -> C17552
C17552 -> R08769 -> C17551
C17552 -> R08773 -> C17560
C17560 -> R08773 -> C17552
C17560 -> R08774 -> C17561
C17561 -> R08774 -> C17560
C17561 -> R08775 -> C17562
C17562 -> R08775 -> C17561
C17562 -> R08781 -> C00399
C18237 -> R09735 -> C19848
C18239 -> R11372 -> C21310
C19673 -> R09543 -> C01209
C19845 -> R09725 -> C19846
C19845 -> R10121 -> C00173
C19846 -> R10122 -> C20378
C19848 -> R09726 -> C05924
C19871 -> R11581 -> C18237
C20231 -> R09936 -> C00106
C20239 -> R09959 -> C04895
C20246 -> R10247 -> C11437
C20246 -> R10247 -> C15809
C20246 -> R10247 -> C15814
C20248 -> R10002 -> C20239
C20249 -> R09947 -> C20231
C20253 -> R09982 -> C20249
C20258 -> R10147 -> C00441
C20372 -> R10115 -> C01209
C20372 -> R10115 -> C19673
C20373 -> R10116 -> C20372
C20374 -> R10117 -> C20373
C20375 -> R10118 -> C20374
C20376 -> R10119 -> C01209
C20376 -> R10119 -> C20375
C20377 -> R10120 -> C20376
C21015 -> R10993 -> C02356
C21016 -> R10994 -> C21015
C21028 -> R01415 -> C00178
C21284 -> R11329 -> C05770
C21310 -> R09394 -> C00044
G09660 -> R07818 -> G13040
G13040 -> R07818 -> G09660

Conclusion

Many reactions occur in the overview map eco01100, although they exist no where in the union of all known metabolism pathways.

Further research shows the reasons for such strange results:

  • If a gene of eco produces an enzyme that can be used in multiple pathways, eco01100 automatically includes the reactions performed by that enzyme into all possible positions of the global map, even those positions inside a pathway which eco supposedly does not have. Because the reaction acts on a different substrate in this “non-existing” pathway, it stands out in this experiment. This is most likely not an error in KEGG’s data, but a corner-case where our methodology fails to handle the data. Example: G09660 -> R07818 -> G13040 (gene eco:b1617)
  • The same reaction (same substrate and product) is marked as irreversible in a single pathway, in eco01100, however, it is marked a reversible. 01100 generally seems to not support irreversible edges. Because this experiment uses a directed graph, the reverse direction stands out. Example: C21310 -> R09394 -> C00044
  • Maybe more.

The overview map 01100 is, therefore, not suitable for exact research of reactions.