FEV_KEGG.Experiments.51 module¶

Context¶

In 50, we printed long lists of enzymes and EC numbers. This is hard to read and hard to use for further research, which is why we now export this information in HTML.

Question¶

Which neofunctionalisations exist in Archaea? Grouped by function change, sorted lexicographically, annotated with links to KEGG, annotated with human-readable names (if possible), and exported into an HTML file.

Method¶

get clade
get neofunctionalisations
export to HTML, including links and further info

Result¶

[see file Archaea_Neofunctionalisations-For-FunctionChange.html]

Conclusion¶

Much more useful than a plain text list of cryptic IDs.

FEV_KEGG.Experiments.51.getClade()[source]¶